Enzyme Kinetics for Systems Biology
A text book for undergraduates classes in systems biology and a reference guide for graduates and other professionals (Current Print Version: 1.04).
This text is geared towards those who need a reference or classroom text book that describes the various rate laws one can use to build a computer model of a cellular network. The text includes some topics not found in a typical enzyme kinetics text book, these include chapters on elasticities, generalized rate laws and the kinetic laws that one would use to build gene regulatory networks. The book is priced at $9.95 for the ebook or $39.95 for the paperback. For the ebook version there are free updates until the second edition is released.
Current print version: 1.04
Chapters include:
- Reaction Kinetics
- Elasticities
- Basic Enzyme Kinetics
- Enzyme Inhibition and Activation
- Multireactant Rate Laws
- Cooperativity
- Allostery
- Generalized Rate Laws
- Kinetics of Gene Regulation
- Basic Thermodynamics
New book for 2012: Control Theory for Biologists
A text book for undergraduates classes in systems and synthetic biology and a reference guide for graduates and other professionals.
Software Tutorials
Jarnac Video Tutorials
A Five Minute Introduction to Jarnac
Using Time Course Simulation Command
Introduction to Running Consecutive Simulation
A more Sophisticated Example of Running Consecutive Simulations
Teaching Videos
Basic Concepts:
1. Stoichiometric Amounts
2. Rates of Change
3. Stoichiometric Coefficients Part 1
4. Stoichiometric Coefficients Part 2
5. Reaction Rate
6. Units
Stoichiometric Networks: